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  1. Yahara K, Horie R, Kobayashi I, Sasaki A (2007) Evolution of DNA double-strand break repair by gene conversion: coevolution between a phage and a restriction-modification system. Genetics (in press)
  2. Kamo M, Sasaki A, Boots M, The role of trade-off shapes in the evolution of virulence in spatial host-parasite interactions: An approximate analytical approach. J. Theor. Biol. (in press)
  3. Kawaguchi I, Sasaki A, The wave speed of intergradation zone in two-species lattice Mulerian mimicry model. J. Theor. Biol. 243, 594-603 (2006)
  4. Nakabayahi J, Sasaki A, A mathematical model for apoptosome assembly: The optimal cytochrome c/Apaf-1 ratio. J. Theor. Biol. 242, 280-287 (2006)
  5. Boots M, Kamo M, Sasaki A, The implications of spatial structure within populations to the evolution of parasites, In Disease evolution: Models, concepts, and data analyses, Z. Feng, U. Dieckmann and S. Levin (ed), pp. 3-22, DIMACS: Series in Discrete Mathematics and Theoretical Computer Science, American Mathematical Society (2006)
  6. Andreasen V, Sasaki A, Shaping the phylogenetic tree of influenza by cross-immunity. Theor. Pop. Biol. 70, 164-173 (2006).
  7. Krakauer D, Sasaki A, The Greater than Two-Fold Cost of Integration for Retroviruses. Proc. R. Soc. Lond. B 273, 1159-1163 (2006).
  8. Ohtsuki A, Sasaki A, Epidemiology and disease-control under gene-for-gene plant-pathogen interaction. J. Theor. Biol. 238, 780-794 (2006).
  9. Kamo M, Sasaki A, Evolution towards multi-year periodicity in epidemics. Ecology Letters 8, 378-385 (2005).
  10. Nakabayashi J, Sasaki A, Optimal phosphorylation step number of intracellular signal transduction pathway. J. Theor. Biol. 233, 413-421 (2005).
  11. Taylor C, Fudenberg D, Sasaki A, Nowak M A, Evolutionary game dynamics in finite populations. Bull. Math. Biol. 66, 1621-1644 (2004).
  12. Nowak M A, Sasaki A, Taylor C, Fudenberg D, Emergence of cooperation and evolutionary stability in finite populations. Nature 428, 646-650 (2004).
  13. Wodarz D, Sasaki A, Apparent competition and recovery from infection. J. Theor. Biol. 227, 403-412 (2004).
  14. Iwanaga A, Sasaki A, Evolution of hierarchical cytoplasmic inheritance in plasmodial slime mould, Physarum polycephalum. Evolution 58, 710-722 (2004).
  15. Boots M, Hudson P J, Sasaki A, Large shifts in pathogen virulence relate to host population structure. Science 303, 842-845 (2004).
  16. Kawaguchi I, Sasaki A, Mogi M, Combining zooprophylaxis and insecticide spraying: a malaria-control strategy limiting the development of insecticide resistance in vector mosquitoes. Proc. R. Soc. Lond. B 271, 301-309 (2004).
  17. Kawaguchi I, Sasaki A, Boots M, Why are dengue virus serotypes so distantly related? -- Enhancement and limiting serotype similarity between strains. Proc. R. Soc. Lond. B 270, 2241-2247 (2003).
  18. Sasaki A, Nowak M A, Mutation landscapes. J. Theor. Biol. 224, 241-247 (2003).
  19. Nakamaru M, Sasaki A, Can transitive inference evolve in animals playing hawk-dove game? J. Theor. Biol. 222, 461-470 (2003).
  20. Boots M, Sasaki A, Parasite evolution and extinctions. Ecology Letters 6, 176-182 (2003).
  21. Krakauer D C, Sasaki A, Noisy clues to the origin of life. Proc. R. Soc. Lond. B 269, 2423-2428 (2002).
  22. Gilchrist M, Sasaki A, Modeling host-parasite coevolution: A nested approach based on mechanistic models. J. Theor. Biol. 218, 289-308 (2002).
  23. Kamo M, Sasaki A, The effect of cross-immunity and seasonal forcing in multi-strain epidemic model. Physica D 165, 228-241 (2002).
  24. Boots M, Sasaki A, Host extinction in spatially explicit host-parasite systems. American Naturalist 159, 706-709 (2002).
  25. Sasaki A, Hamilton W D, Ubeda F, Clone mixture and a pacemaker: new facets of Red-Queen theory and ecology. Proc. R. Soc. Lond. B 269, 761-772 (2002).
  26. Sasaki A, Kawaguchi I, Yoshimori A, Spatial mosaic and interfacial dynamics in Mullerian mimicry system. Theor. Pop. Biol. 61, 49-71 (2002).
  27. Sasaki A, Coevolution in gene-for-gene systems. In "Adaptive Dynamics of Infectious Diseases: In pursuit of virulence management", U. Diekmann, J. A. J. Metz, W. Sabelis and K. Sigmund (Ed.), pp. 233-247, Cambridge University Press, Cambridge, (2002).
  28. Satake A, Sasaki A, Iwasa Y, Variable timing of reproduction in unpredictable environments: adaptation of flood plain plants. Theor. Pop. Biol. 60, 1-15 (2001).
  29. Boots M, Sasaki A, The evolutionary dynamics of local infection and global reproduction in host-parasite interactions. Ecology Letters 3, 181-185 (2000).
  30. Sasaki A, Host-parasite coevolution in multilocus gene-for-gene system. Proc. R. Soc. Lond. B 267, 2183-2188 (2000).
  31. Haraguchi Y, Sasaki A, Evolution of parasite virulence and transmission rate in a spatially structured population. J. theor. Biol. 203, 85-96 (2000).
  32. Sasaki A, Haraguchi Y, Antigenic drift of viruses within a host: A finite site model with demographic stochasticity. J. Mol. Evol. 51, 245-255 (2000).
  33. Boots M, Sasaki A, 'Small worlds' and the evolution of virulence: infection occurs locally and at a distance. Proc. R. Soc. Lond. B 266, 1933-1938 (1999).
  34. Sasaki A, de Jong G, Density dependence and unpredictable selection in a heterogeneous environment: Compromise and polymorphism in the ESS reaction norm. Evolution 53, 1329-1342 (1999).
  35. Read A F, Aaby P, Antia R, Ebert D, Ewald P W, Gupta S, Holmes E C, Sasaki A, Shields D, Taddei F, Moxon E R, What can evolutionary biology contribute to understanding virulence? In "Evolution in Health and Disease", Steve Stearns, Ed., pp. 205-215, Oxford University Press (1999).
  36. Sasaki A, Godfray H C J, A model for the coevolution of resistance and virulence in coupled host-parasitoid interactions. Proc. R. Soc. Lond. B 266, 455-463 (1999).
  37. Ellner S, Sasaki A, Haraguchi Y, Matsuda H, Speed of invasion in lattice population models: pair-edge approximation. J. Math. Biol. 36, 469-484 (1998).
  38. Sasaki A, Ellner S, Quantitative genetic variance maintained by fluctuating selection with overlapping generations: Variance components and covariances. Evolution 51, 682-696 (1997).
  39. Haraguchi Y, Sasaki A, Evolutionary pattern of intra-host pathogen antigenic drift: Effect of cross-reactivity in immune response. Phil. Trans. R. Soc. Lond. B 352, 11-20 (1997).
  40. Sasaki A, Clumped distribution by neighborhood competition. J. theor. Biol. 186, 415-430 (1997).
  41. Haraguchi Y, Sasaki A, Host-parasite arms race in mutation modifications: Indefinite escalation despite a heavy load? J. theor. Biol. 183, 121-137 (1996).
  42. Ellner S, Sasaki A, Patterns of genetic polymorphism maintained by fluctuating selection with overlapping generations. Theor. Pop. Biol. 50, 31-65 (1996).
  43. Sasaki A, Ellner S, The evolutionarily stable phenotype distribution in a random environment. Evolution 49, 337-350 (1995).
  44. Sasaki A, Evolution of antigen drift and switching: Continuously evading pathogens. J. theor. Biol. 168, 291-308 (1994).
  45. Sato K, Matsuda H, Sasaki A, Pathogen invasion and host extinction in lattice structured populations. J. Math. Biol. 32, 251-268 (1994).
  46. Sasaki A, The evolution of host and pathogen genes under epidemiological interaction. In "Population Pareo-Genetics. Proceeding of The Seventeenth Taniguchi International Symposium on Biophysics", N. Takahata, Ed., pp. 247-263, Japan Scientific Society Press, Tokyo, (1992).
  47. Matsuda H, Sato K, Sasaki A, Ogita N, Stochastical mechanics of population -- The lattice Lotka-Volterra model. Prog. Theor. Phys. 88, 1035-1049 (1992).
  48. Sasaki A, Iwasa Y, Optimal growth schedule of pathogens within a host: Switching between lytic and latent cycles. Theor. Pop. Biol. 39, 201-239 (1991).
  49. Ishii K, Matsuda H, Iwasa Y, Sasaki A, Evolutionarily stable mutation rate in a periodically fluctuating environment. Genetics 121, 163-174 (1989).
  50. Matsuda H, Tamachi N, Ogita N, Sasaki A, A lattice model for population biology. In "Mathematical topics in population biology, morphogenesis and neurosciences", Lecture Notes in Biomathematics 71, 154-161 (1987).
  51. Iwasa Y, Sasaki A, Evolution of the number of sexes. In "Mathematical Topics in Population Biology, Morphogenesis, and Neurosciences". Lecture Notes in Biomathematics 71, 144-153
  52. Iwasa Y, Sasaki A, Evolution of the number of sexes. Evolution 41, 49-65 (1987).
  53. Sasaki A, Iwasa Y, Optimal Recombination rate in fluctuating environments. Genetics 115, 377-388 (1987).

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